The IRMA Community
Newsletters
Research IRM
Click a keyword to search titles using our InfoSci-OnDemand powered search:
|
Role of Supercomputers in Bioinformatics
|
|
Author(s): Anamika Singh (Department of Botany, Maitreyi College, University of Delhi, India), Rajeev Singh (Division of RCH, Indian Council of Medical Research, India)and Neha Gupta (Northeastern University, USA & Osmania University, India)
Copyright: 2015
Pages: 19
Source title:
Research and Applications in Global Supercomputing
Source Author(s)/Editor(s): Richard S. Segall (Arkansas State University, USA), Jeffrey S. Cook (Independent Researcher, USA)and Qingyu Zhang (Shenzhen University, China)
DOI: 10.4018/978-1-4666-7461-5.ch009
Purchase
|
Abstract
Due to the involvement of effective and client-friendly components (i.e. supercomputers), rapid data analysis is being accomplished. In Bioinformatics, it is expanding many areas of research such as genomics, proteomics, metabolomics, etc. Structure-based drug design is one of the major areas of research to cure human malady. This chapter initiates a discussion on supercomputing in sequence analysis with a detailed table summarizing the software and Web-based programs used for sequence analysis. A brief talk on the supercomputing in virtual screening is given where the databases like DOCK, ZINC, EDULISS, etc. are introduced. As the chapter transitions to the next phase, the intricacies of advanced Quantitative Structure-Activity Relationship technologies like Fragment-Based 2D QSAR, Multiple-Field 3D QSAR, and Amino Acid-Based Peptide Prediction are put forth in a manner similar to the concept of abstraction. The supercomputing in docking studies is stressed where docking software for Protein-Ligand docking, Protein-Protein docking, and Multi-Protein docking are provided. The chapter ends with the applications of supercomputing in widely used microarray data analysis.
Related Content
|
Radhika Kavuri, Satya kiranmai Tadepalli.
© 2024.
19 pages.
|
|
Ramu Kuchipudi, Ramesh Babu Palamakula, T. Satyanarayana Murthy.
© 2024.
10 pages.
|
|
Nidhi Niraj Worah, Megharani Patil.
© 2024.
21 pages.
|
|
Vishal Goar, Nagendra Singh Yadav.
© 2024.
23 pages.
|
|
S. Boopathi.
© 2024.
24 pages.
|
|
Sai Samin Varma Pusapati.
© 2024.
25 pages.
|
|
Swapna Mudrakola, Krishna Keerthi Chennam, Shitharth Selvarajan.
© 2024.
11 pages.
|
|
|